Genome Sequencing and Assembly of Lepisosteus oculatus (Spotted Gar). - SRA

SRX091935: Genome Sequencing and Assembly of Lepisosteus oculatus (Spotted Gar).
2 ILLUMINA (Illumina HiSeq 2000) runs: 76.6M spots, 16.1G bases, 10.4Gb downloads

UUID: e63dfbdd-5a67-404e-b060-ff99653148a7

Design: 3kb genomic insert library

Submitted by: Broad Institute (BI)

Study: Lepisosteus oculatus genome sequencing

PRJNA68247 • SRP000282 • All experiments • All runs

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Lepisosteus oculatus (spotted gar) genome sequencing

Sample: Generic sample from Lepisosteus oculatus

SAMN00706774 • SRS256238 • All experiments • All runs

Organism: Lepisosteus oculatus

Library:

Name: Solexa-67799

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward barcode

Group tag	Basecalls
	AGGTGCGA

110 reverse

Experiment attributes: (show all 7 attributes...) (hide...)

gssr_ids: 109818.0, 109819.0, 110812.0, 110813.0

lsids: broadinstitute.org:bsp.prod.sample:22KC9, broadins (show full text...)(hide...)

broadinstitute.org:bsp.prod.sample:22KC9, broadinstitute.org:bsp.prod.sample:22KCA, broadinstitute.org:bsp.prod.sample:23IZB, broadinstitute.org:bsp.prod.sample:23IZC

material_type: DNA:DNA Genomic

project: G14236

root_sample_id: SM-21CI1

sample_ids: SM-22KC9, SM-22KCA, SM-23IZB, SM-23IZC

work_request: 25764

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2011-08-06 05:40:14.0	GAPipeline	RTA1.12.4.1	Sequencer Application 1.4.5

Runs: 2 runs, 76.6M spots, 16.1G bases, 10.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR331104	37,924,351	8G	5.1Gb	2011-08-17
SRR331105	38,664,431	8.1G	5.2Gb	2011-08-17

ID:: 104730

SRA

Sequence Read Archive

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